Insertion junction: CLIP2.012012_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012012
Chromosome:chromosome 9
Location:831224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403750 HAD6 Halo-acid dehalogenase-like hydrolase; (1 of 1) PTHR12725:SF55 - F14L17.7 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAACAATGGTACAGGGGAGGTGACGGACCTCCCCTGCAATGGTATGT
Internal bar code:AGCAGCCGAGCGAGCGTTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1549
LEAP-Seq percent confirming:40.9091
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATGCGTCTCTCTTGAG
Suggested primer 2:CGAGTTGAGGAGAGCTAGCG