Insertion junction: CLIP2.012014_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012014
Chromosome:chromosome 3
Location:3016709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163500 EX1,CGLD21 Executer 1, chloroplastic; (1 of 1) PTHR33917//PTHR33917:SF1 - FAMILY NOT NAMED // PROTEIN EXECUTER 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCGGGCCGTCCTTGCCCGCCCACCAGCCCGCCAGCCCCACCAGGCCG
Internal bar code:GCACACTTCGAATCATTATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2600
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACGCACACGCACATACA
Suggested primer 2:ATCATCTTGTTCTCGCGCCA