Insertion junction: CLIP2.012016_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012016
Chromosome:chromosome 7
Location:123801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313000 (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGGCTAACGGCGGCAGCATGGCAAGTCGTGGCGCATGTTGTTCACT
Internal bar code:TCTGGTAATAGTCTATGGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2417
LEAP-Seq percent confirming:98.2759
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCAAGTGCCCTGTTGTG
Suggested primer 2:GCTATTGCTCTTCGGCTTGC