Insertion junction: CLIP2.012017_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012017
Chromosome:chromosome 11
Location:3701497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478800 (1 of 1) PTHR31027//PTHR31027:SF2 - FAMILY NOT NAMED // PROTEIN F18H3.4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGAAGGGAGGGTAGGGAGGCGGGCCGGGGGCAACGGCGCGAAAGTG
Internal bar code:TCGTTAACCAGACGTTCGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:216
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTTGTGTCTCCTGCTGCT
Suggested primer 2:ACCACACCTCATCACACCAC