Insertion junction: CLIP2.012027_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012027
Chromosome:chromosome 7
Location:5835531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353600 MMP7 Metalloproteinase of VMP family; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTAACGAATGCCGTCGCTCTCGTGCTGCTTATGATCCGCAGTGCGCAC
Internal bar code:GACTGCGGCAGGGGTTATACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2408
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:149
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:149

Suggested primers for confirmation by PCR

Suggested primer 1:AACACAGACCAACACTGCCA
Suggested primer 2:CATGGACAACGACCAGGTCA