Insertion junction: CLIP2.012030_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012030
Chromosome:chromosome 7
Location:4609218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344300 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGCCACTGCGCGGAAACCGCTGCATTGGCACCGTCGCTCCGATTTCA
Internal bar code:TGTTCCCAATAATACATGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2697
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCGCTAAATGCTTCGTC
Suggested primer 2:TTGGTCTGTTGGGCTGTGTT