Insertion junction: CLIP2.012030_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012030
Chromosome:chromosome 7
Location:4609221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344300 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACGTCCACCACTCTGCAGGTTCCTGTCATTCCCGTTGCCCCACCCTCA
Internal bar code:GTACGGACTCAAATTTAATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1126
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTCTGTTGGGCTGTGTT
Suggested primer 2:CTGCCGCTAAATGCTTCGTC