Insertion junction: CLIP2.012039_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012039
Chromosome:chromosome 12
Location:9075094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544450 CSE20 Predicted protein of CSE family CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCACCTGGCTGGCCAGCACCTTCCAGGCGTTGGCGAAGGCGAGCTTG
Internal bar code:GGTGTTTAATAACAACACACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:115
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGATCCCGTCACATACCG
Suggested primer 2:GTACCGATACAGCCCAGTCG