Insertion junction: CLIP2.012040_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012040
Chromosome:chromosome 7
Location:786499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317950 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCCAGGCTCCTGCTCCTGCTGCTGATGCTGGCACGATTGTTCTTGC
Internal bar code:TCCCTAGTTGCCTCCGGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2417
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCCTCGGGAGCAAACAA
Suggested primer 2:GCACGGATCTCGCTGTCATA