Insertion junction: CLIP2.012041_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012041
Chromosome:chromosome 12
Location:8140823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552150 (1 of 1) PF00069//PF13185 - Protein kinase domain (Pkinase) // GAF domain (GAF_2) intron
lncRNA_TCONS_00120808 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCACCAAAAACATGGGCAGAGTTCAGGTTACCGGGACTGGCAATCAG
Internal bar code:GGGTTGCATAACTGCGAGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2996
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCTCATGGAGGTGATAT
Suggested primer 2:TCACTGCTACATGTGCGTGT