Insertion junction: CLIP2.012041_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012041
Chromosome:chromosome 12
Location:8140825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552150 (1 of 1) PF00069//PF13185 - Protein kinase domain (Pkinase) // GAF domain (GAF_2) intron
lncRNA_TCONS_00120808 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAATGGATGCTGCCATCGCTCGCGGCTCACAGCTTGTTTTCGCACAG
Internal bar code:TTGTGCAAGTACCAGGCCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTGCTACATGTGCGTGT
Suggested primer 2:CGCGCTCATGGAGGTGATAT