Insertion junction: CLIP2.012042_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012042
Chromosome:chromosome 8
Location:1854953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g367250 FAP176 (1 of 239) IPR016024 - Armadillo-type fold; Flagellar Associated Protein 176 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCAGGAGAGGACACTACGGCGAGTGCACCGGTGACGTAAGCCTGTA
Internal bar code:TTTTTTTCGGGATGCGGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:201
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAAATGGTAGACGGTGGGCA
Suggested primer 2:ACTGGCAACCATTTCGCAAC