Insertion junction: CLIP2.012052_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012052
Chromosome:chromosome 6
Location:4247497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278251 ACRY1,aCRY (1 of 1) K02295 - cryptochrome (CRY); Animal-like Cryptochrome CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCGATGAGGTGCTCCTCGAACACCTCCATGCCGCGCTCCCAGCTGAC
Internal bar code:TATGACACAATTTATGCGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:609
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCTTTCGCACTTAATCG
Suggested primer 2:GTACTTGGCTGGCATGTCCT