Insertion junction: CLIP2.012053_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012053
Chromosome:chromosome 12
Location:6578784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00110013
lncRNA_TCONS_00110014

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCTGTAAGTCAACTCCCACGTATCTAATGTGCTCTTATCATATCAAA
Internal bar code:TGGACATGTGGTGACGGTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCAACAGCACCTGAC
Suggested primer 2:TGTGAGAGCCTGTCAACGTC