Insertion junction: CLIP2.012054_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012054
Chromosome:chromosome 17
Location:3419074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAAGAAAAACACAGTCGCGCCTGCGCCCCGTTCACAAGCAGCGCAGC
Internal bar code:AATTAACCACTTAGTCATTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2690
LEAP-Seq percent confirming:97.8261
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTATAACGGGGCGTCGA
Suggested primer 2:ACCATGCACGCTTACTTGGA