Insertion junction: CLIP2.012064_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012064
Chromosome:chromosome 6
Location:5284150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284500 RPH1,RNPH1 3'-5' Exoribonuclease PH component of the Exosome; (1 of 1) K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCCTCAATTTCTTCCGCAATGGTTTTGGACTACCGGGAACTGTCAA
Internal bar code:TGGGATAGGGGTAAGATAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1594
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGTAGCAGGGCCAATAT
Suggested primer 2:GCACCAGGTATAGCGAGTCC