Insertion junction: CLIP2.012091_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012091
Chromosome:chromosome 5
Location:3086333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755597 Chlorophyll a /Pheophorbide a oxygenase-related protein; (1 of 2) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGTTCGAGAGGCTGGGCTGCGCGCCAGGCTCGGCCTGTTGGTCGCA
Internal bar code:ATGGGTGAGGGAGCGGTGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1929
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGCAGTGCAAAGAAGCA
Suggested primer 2:GCCAGAGTCTCAGGTGGTTC