Insertion junction: CLIP2.012098_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012098
Chromosome:chromosome 1
Location:3603354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023500 FAL2 Similar to Flagellar Associated Protein FAP234 CDS
Cre01.g023550 FAP234,TPG2 Flagellar Associated Protein 234; (1 of 1) PTHR24365//PTHR24365:SF301 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTATTGCTCATCATCCCGAGCCTCCATGAGCTTCAACCGCGCTTGCA
Internal bar code:TCCAGATCTTAACATTTCCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1568
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCCCTGATCCTCTGCCT
Suggested primer 2:GCAGATGAGACCTCCCGATC