Insertion junction: CLIP2.012099_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012099
Chromosome:chromosome 3
Location:494655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145027 (1 of 14) PF13371 - Tetratricopeptide repeat (TPR_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCCCACACGCAGCCAACGCCGGCGCGGCATTCGGCCCGCACTCTAC
Internal bar code:TACGTCAGCACCTGTCGACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1430
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTTCGAACCGCTGGTTG
Suggested primer 2:CTCAGGTGCTGGTGGAGATG