Insertion junction: CLIP2.012103_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012103
Chromosome:chromosome 3
Location:7409427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206202 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase 3'UTR
Cre03.g800389 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGGTGAGATCAATGGATTCCCGCCAGTTCAACATCAACGAGTGCTGT
Internal bar code:TTCCGTAGTTCCGATCTTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3358
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGTGACCCCGTGTTACA
Suggested primer 2:CTTTCACGTGACAGGCTTGC