Insertion junction: CLIP2.012107_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012107
Chromosome:chromosome 12
Location:9462334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540750 (1 of 1) PF05608 - Protein of unknown function (DUF778) (DUF778) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTACCTCGGCCTTGCACCACCTTCAGGCCCCTGTGGGCATGTTGCGCTG
Internal bar code:AGGATCAGAATGTAGTCTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGAGGCTACAGTGCTAG
Suggested primer 2:GCGTTTGCATTGACTGGTGT