Insertion junction: CLIP2.012110_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012110
Chromosome:chromosome 16
Location:2039882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656950 (1 of 1) PTHR13140:SF300 - PROTEIN TAG-278-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTGTTGACTCGCCTGGACGCGGTGGAGGCTAGCCGCAAGCAGCTTGA
Internal bar code:GGTCTCGATAAGAGACTTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4134
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTTCCGAGACGTTCAA
Suggested primer 2:CTGCAAGCCACCAAGGAGTA