Insertion junction: CLIP2.012111_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012111
Chromosome:chromosome 2
Location:8477565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142000 CrUbcE2_1,CrUbc9,CreSCE1a,CrSCE1,UBC4,SCE1 (1 of 1) PTHR24067//PTHR24067:SF153 - UBIQUITIN-CONJUGATING ENZYME E2 // SUBFAMILY NOT NAMED; SUMO-conjugating enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTATTGCCCCTGCGCAGTGCAAGTTCCCCGCGGGCTTCTTCCACCCCA
Internal bar code:GCAAGGGTAACATAGATCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:119
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCACGTCCGTCTATCTCC
Suggested primer 2:TAGGGTTTGACTCGCAGCAG