Insertion junction: CLIP2.012117_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012117
Chromosome:chromosome 3
Location:4279020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00065786

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTCCCATCACTGGATGGTGACCGCTCGGTGCCGGTGGGGCGCGGCGCC
Internal bar code:GAAATGCGCCGCATCAGGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2344
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGACACTTGAGAACTGA
Suggested primer 2:TAGGTTGCTGTTCTGCTGGG