Insertion junction: CLIP2.012120_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012120
Chromosome:chromosome 7
Location:1697552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325711 (1 of 2) K19363 - lipopolysaccharide-induced tumor necrosis factor-alpha factor (LITAF) outside_mRNA
Cre07.g800783 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATCGGGTTCCGCCTCCACTGCACCTGCCACCGCAGCCTCGGGAGCTGC
Internal bar code:GGCTCCTACAAATACCAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4910
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGCAGGAGGTAAGCTGG
Suggested primer 2:TATACCCCGGACTCAGCACA