Insertion junction: CLIP2.012128_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012128
Chromosome:chromosome 6
Location:4990342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281526 (1 of 1) IPR001660//IPR002048//IPR011011//IPR013761 - Sterile alpha motif domain // EF-hand domain // Zinc finger, FYVE/PHD-type // Sterile alpha motif/pointed domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGACGATAGCTTCAGTCAGCGGCAGTCGCTGTGTACGTCTCTGTGGGC
Internal bar code:CGTTAGCTCGCACACCTTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1157
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGCATCCAACAGTTCCG
Suggested primer 2:TCATACCGTTTGAGGGTGGC