Insertion junction: CLIP2.012133_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012133
Chromosome:chromosome 6
Location:3118429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275450 (1 of 1) PF00069//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACTTCGCTGGTGAAGCTGCAGGCCTCCTTCAACGCCTTCCGCGCCC
Internal bar code:AAATGTACATGGTGTATTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:864
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAGTGAGATGCAGGCTA
Suggested primer 2:ACCCAAGCTTCCTTCTCACG