Insertion junction: CLIP2.012134_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012134
Chromosome:chromosome 5
Location:1557878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234666 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCATGAGTATTTTGCGCTGCACCTTGCCACGGTCACTGGCCTGGCTG
Internal bar code:GTGTACGCGATCGGTCGAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1655
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTTGCTACGTTTGCAA
Suggested primer 2:GCACTGCAGCAAACGAGAAA