Insertion junction: CLIP2.012134_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012134
Chromosome:chromosome 5
Location:1557880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234666 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGGGCAGCGGCGGCGGTGCAGGGGAGGAGCGCCCGCAGGCAGAGCC
Internal bar code:GTGTACGCGATCGGTCGAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4770
LEAP-Seq percent confirming:99.3506
LEAP-Seq n confirming:153
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:154

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTGCAGCAAACGAGAAA
Suggested primer 2:CACCGTTGCTACGTTTGCAA