Insertion junction: CLIP2.012136_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012136
Chromosome:chromosome 10
Location:6696515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466600 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCCGCTGCCTCGGCTGGCCCCACCACACGGCGGCAGGTGGTGACTCG
Internal bar code:AGTGTGGTTCGGCGTGCTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1748
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCAGGGCTTGCATCTTCC
Suggested primer 2:AGGGGACGTGAGAGAGCTAG