Insertion junction: CLIP2.012138_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012138
Chromosome:chromosome 3
Location:2062841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156100 (1 of 1) K11984 - U4/U6.U5 tri-snRNP-associated protein 1 (SART1, HAF, SNU66) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAAGAAGGCCGCCACCTCAGAGGACCCCAGCGCCGAGCTGGATCGGC
Internal bar code:CCGTGATGGATACACATGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:107
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCCCTACTTGTTGCCTG
Suggested primer 2:TTGCATGTCTCGACCTCCAC