Insertion junction: CLIP2.012141_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012141
Chromosome:chromosome 2
Location:5361592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113500 (1 of 1) IPR001322//IPR014867 - Lamin Tail Domain // Spore coat protein CotH intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATCTGCCACAACACACCTGCTGTCGCTCCCCGCCTACCTGCTTGCCG
Internal bar code:GGGTCTTGGTAGGGCATACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTGCTCCCGTTGTGTC
Suggested primer 2:CTTGTCTTGCGAGGTCCTGT