Insertion junction: CLIP2.012148_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012148
Chromosome:chromosome 4
Location:2120208
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g219750 HEL22 (1 of 1) PTHR13710//PTHR13710:SF94 - DNA HELICASE RECQ FAMILY MEMBER // ATP-DEPENDENT DNA HELICASE RECQ FAMILY PROTEIN; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAATCAATAGAGCGAGGGGAGGTGGGGATGGGGTGGTGACGGCGGCGC
Internal bar code:TGCGGGTGCCTTATGGGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:727
LEAP-Seq percent confirming:67.7419
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATGACGCTGCTGATGGT
Suggested primer 2:ACACCACGGCATTGCTTTTC