Insertion junction: CLIP2.012149_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012149
Chromosome:chromosome 11
Location:3117991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475432 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTTGTTTGGGGACTGGTGGCTGCTTGCCTGTGCAGCAGTCCTCCCT
Internal bar code:TAAGGTGTACTACCAATTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1231
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGAATGAGAATGCCGCG
Suggested primer 2:GGGCGAACAATCTTCAAGCC