Insertion junction: CLIP2.012152_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012152
Chromosome:chromosome 12
Location:8251205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551550 (1 of 1) PF00098//PF02689//PF05970//PF13604 - Zinc knuckle (zf-CCHC) // Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) // AAA domain (AAA_30) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGAAGCCGAAGAAACCGTTTCTCCGCTCCCTAGGCTTTGACAGACCC
Internal bar code:CTTGGTCCGGTGTCCCACAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:214
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATCAACCGCCTCAAGGG
Suggested primer 2:TGCAAAAGAGCGAGGAGGAG