Insertion junction: CLIP2.012164_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012164
Chromosome:chromosome 3
Location:1879972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154700 (1 of 3) PF01937 - Protein of unknown function DUF89 (DUF89) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCAGCGCCTCGGTCTCGGCCGCCAGGTCCGCCGCCGCCGCCGCCGA
Internal bar code:GTGTTGTGTTACCCTATAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1289
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTGGAGTGCTACATGT
Suggested primer 2:GAGATACCCGAGGTCTCCGA