Insertion junction: CLIP2.012175_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012175
Chromosome:chromosome 15
Location:1222594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801721 NCL61 Nuclear Control of chloroplast-Like 61; (1 of 19) PTHR21228//PTHR21228:SF20 - FAST LEU-RICH DOMAIN-CONTAINING // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACCACCACATTCTACAGCTGCTGCCGACGAGTCCGCCTCCCCGGCC
Internal bar code:ATACGAAGGTCTTCACAAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1186
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGCAGAGGAGTCGCATC
Suggested primer 2:GTTGGGCCCTGATAGCATGT