Insertion junction: CLIP2.012177_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012177
Chromosome:chromosome 6
Location:4008190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278210 STA5,PGM,GPM1,PGM1 Phosphoglucomutase 1; (1 of 1) PTHR22573//PTHR22573:SF2 - PHOSPHOHEXOMUTASE FAMILY MEMBER // PHOSPHOGLUCOMUTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATGGCCTCTATCGAGTGGTTCGAGGTCAACAAATGCAACGGTTCGCA
Internal bar code:TGTCCATGAGCTTACTTGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGATCTAGGCCCTTCCACGT
Suggested primer 2:GCCCACGACCACCTTCTTAA