Insertion junction: CLIP2.012185_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012185
Chromosome:chromosome 12
Location:1124241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491000 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGATTTCCGTGTGTTCCCGCCGGCTTGATGCGGCACGGCCGGGAGGG
Internal bar code:CGAGCTGAAAGCTTGGACGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:908
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGAAGGTGTCGGAAGG
Suggested primer 2:AGGGCTTAGTCCAGAGGGAG