Insertion junction: CLIP2.012187_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012187
Chromosome:chromosome 16
Location:2324810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659000 ATG13 (1 of 1) K08331 - autophagy-related protein 13 (ATG13); AuTophaGy related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCGCGTGTGTGTGTGGCAGTGCTGACAACGTGCCCGTTCGCGCTTC
Internal bar code:GGTTGGATGGGAGTAGGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:640
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGAGCAAGACCCAACAT
Suggested primer 2:GCTCGCACACACAAACTTGT