Insertion junction: CLIP2.012189_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012189
Chromosome:chromosome 12
Location:6290643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536600 FAP78 Flagellar Associated Protein 78; (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGGCCGCCTCGCGCCGCGCGGCCGCGTGTCCCGGCTCGTACCCGTC
Internal bar code:GAACTTAAGAGCCACGTAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:897
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAAGGGACCTGCATGTG
Suggested primer 2:GTTCCGCAACACACAACTCC