Insertion junction: CLIP2.012194_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012194
Chromosome:chromosome 13
Location:4879100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605200 MMP29 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGAGTGCAGCTGCGCGTGCTTCTTTGCAGAGGCACCAGGAACAACAG
Internal bar code:GGACGCCTGGTGTTTGGCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2009
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGGGGAAGTGCCAAGTT
Suggested primer 2:AGCCGTACTCATCATCGCTG