Insertion junction: CLIP2.012200_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012200
Chromosome:chromosome 2
Location:4011124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102850 CPZ (1 of 1) IPR000834//IPR016024 - Peptidase M14, carboxypeptidase A // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTTGCAATGCGGAGCGACGCGTTGGATTTTGTGCATGTGTGTTGTCTG
Internal bar code:AAACGTTGGACGCGAACGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1834
LEAP-Seq percent confirming:71.875
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGAAAGCAAGCAGGGTG
Suggested primer 2:CGCAGCAATCCAAATCCGAG