Insertion junction: CLIP2.012212_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012212
Chromosome:chromosome 1
Location:3998546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026250 AGA1 Alpha-galactosidase; (1 of 1) 3.2.1.22 - Alpha-galactosidase / Melibiase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGAGCTGAGAGAATGGACCAGACGGGTGGGAAGGCCAACAGATGGGG
Internal bar code:GTGCAAAGTACGTTTTATCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1803
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACGCCACATACTCCAAA
Suggested primer 2:CGATCGTTTTGGGCATCGTC