Insertion junction: CLIP2.012217_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012217
Chromosome:chromosome 11
Location:3538803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477800 HDA10 (1 of 1) PTHR10625//PTHR10625:SF119 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGTCGTGGCCTTCGGTAGGCCGTGCAGGACAAGGGAACACGTGGGGG
Internal bar code:CTGATCCGTCAACGGTTACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1431
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGAGTAGACGCGTTGTT
Suggested primer 2:GAGTGCTGTGTTGCTTGGTG