Insertion junction: CLIP2.012219_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012219
Chromosome:chromosome 9
Location:729821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404250 SRR29, CEP9,CEP9 Cysteine endopeptidase; (1 of 1) PF00112//PF01476//PF07645 - Papain family cysteine protease (Peptidase_C1) // LysM domain (LysM) // Calcium-binding EGF domain (EGF_CA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCTCCGCGGCTGCCTTCACCTTCATCGCCCCCATCGCCACCTTCACC
Internal bar code:TCAGGGTGCTGAAGACGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3349
LEAP-Seq percent confirming:99.2248
LEAP-Seq n confirming:128
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGAGGTCAATCGAGAGGA
Suggested primer 2:GTGTGGCATGGTGTCTCAGA