Insertion junction: CLIP2.012221_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012221
Chromosome:chromosome 12
Location:4608306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521900 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGTAACTCCCCTCCGATACTTGAACCGTATGCTCCCGCCCTCACCATC
Internal bar code:GTTAAGGCACTGGTTTTCCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1635
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCGATTCCGCCGTCCTA
Suggested primer 2:TTGTTTGCGCCATGTTGAGG