Insertion junction: CLIP2.012222_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012222
Chromosome:chromosome 3
Location:4375308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174900 (1 of 5) PF00536 - SAM domain (Sterile alpha motif) (SAM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGAGTGAGGGTCCACGCATCGCGTGGACAGGTTGTAACTTGATATGCA
Internal bar code:CGTTACTGTTCTGATGGTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4282
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AACGAGAATGAGCGGTGAGG
Suggested primer 2:TCACTCAGTTTCACGGTCCG