Insertion junction: CLIP2.012223_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012223
Chromosome:chromosome 12
Location:5804262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532950 (1 of 4) PF00060//PF00497 - Ligand-gated ion channel (Lig_chan) // Bacterial extracellular solute-binding proteins, family 3 (SBP_bac_3); Ligand-gated ion channel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCCAGTTCCAAACCTGGATCATAGGGTTGAGGGAAGCGGGGCACGCA
Internal bar code:TGTGGCGCGTTCTGGGACTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:98.913
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:AGACTGGACTGCAACCTTCG
Suggested primer 2:ACCATCCACTCCCATCCGTA