Insertion junction: CLIP2.012223_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012223
Chromosome:chromosome 12
Location:5804263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532950 (1 of 4) PF00060//PF00497 - Ligand-gated ion channel (Lig_chan) // Bacterial extracellular solute-binding proteins, family 3 (SBP_bac_3); Ligand-gated ion channel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGTACACGGCTGTGGGTCTGGTGGCGGTGTACGTGTGTCTGCAGGT
Internal bar code:AGGAGCTATAGTTTGCACCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:904
LEAP-Seq percent confirming:4.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATCCACTCCCATCCGTA
Suggested primer 2:AGACTGGACTGCAACCTTCG